Software

Scientific visualization

This is software developed in conjunction with the open-source CGI platform Blender to provide visualizations of a variety of topics of interest to neuroscientists. Code is provided as .blend files and categorized by content. Feel free to download, use, alter and distribute!

Simulated foraging task

Also developed in Blender, this time through the game engine, this code is provided as a .blend file that can be edited and compiled within the Blender environment to become an executable, standalone version. We also provide a pre-compiled executable file for those wishing to simply try the task. Matlab code for importing the resulting data file is also included.

Surfing the Allen atlas in matlab

Developed as a companion for an intro to connectomics demo, for those wishing to use Matlab to explore the Allen Mouse Brain Connectivity Atlas, this code is for you!

Matlab data import from Intel RealSense D400 series sensors

This code enables one to import data from the new generation of RealSense sensors to matlab.